![]() ![]() Quality scores are utilized to enhance mapping accuracy. ![]() Uniquely mapped results or best (top N) results for each read will be reported according to the minimal mismatches and indel length. Any number of mismatches and one insertion/deletion of various lengths between the read and its target region on the reference sequence are allowed. Both single-end and paired-end reads of various lengths from 15bp to 240bp can be handled. ZOOM Lite has a fast and accurate mapping kernel based on a newly designed multiple spaced seeds theory. ZOOM outputs the mapping results of these short reads on the reference sequence. Users input reference genomes and Illumina/Solexa short reads files or AB SOLiD color space reads files in various formats, such as *.fasta, *.fastq, *_seq.txt, *.csfasta etc. ZOOM Lite is a next-generation sequencing data mapping and visualization software.
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